2L6S

Efficacy of an HIV-1 entry inhibitor targeting the GP41 fusion peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY0.1 mM VIR-576, 20 mM [U-100% 2H] SODIUM ACETATE90% H2O/10% D2O20 SODIUM ACETATE-D32.2ambient298
22D 1H-1H TOCSY0.1 mM VIR-576, 20 mM [U-100% 2H] SODIUM ACETATE90% H2O/10% D2O20 SODIUM ACETATE-D32.2ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
simulated annealingXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number20
Conformers Submitted Total Number14
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.2Bruker Biospin
2processingXwinNMR3.2Bruker Biospin
3chemical shift assignmentXEASYBartels et al.
4structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
5refinementAmber9.0Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm