2L3Y
Solution structure of mouse IL-6
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 430 uM [U-100% 15N] IL-6 | 95% H2O/5% D2O | 100 | 6.4 | ambient | 298 | |
2 | 2D 1H-13C HSQC | 350 uM [U-100% 13C; U-100% 15N] IL-6 | 100% D2O | 100 | 6.4 | ambient | 298 | |
3 | 2D 1H-1H TOCSY | 400 uM IL-6 | 100% D2O | 100 | 6.4 | ambient | 298 | |
4 | 2D 1H-1H NOESY | 400 uM IL-6 | 100% D2O | 100 | 6.4 | ambient | 298 | |
5 | 3D CBCA(CO)NH | 350 uM [U-100% 13C; U-100% 15N] IL-6 | 95% H2O/5% D2O | 100 | 6.4 | ambient | 298 | |
6 | 3D HNCACB | 350 uM [U-100% 13C; U-100% 15N] IL-6 | 95% H2O/5% D2O | 100 | 6.4 | ambient | 298 | |
7 | 3D HNCO | 350 uM [U-100% 13C; U-100% 15N] IL-6 | 95% H2O/5% D2O | 100 | 6.4 | ambient | 298 | |
8 | 3D HCCH-TOCSY | 350 uM [U-100% 13C; U-100% 15N] IL-6 | 100% D2O | 100 | 6.4 | ambient | 298 | |
9 | 3D 1H-15N NOESY | 430 uM [U-100% 15N] IL-6 | 95% H2O/5% D2O | 100 | 6.4 | ambient | 298 | |
10 | 3D 1H-15N TOCSY | 430 uM [U-100% 15N] IL-6 | 95% H2O/5% D2O | 100 | 6.4 | ambient | 298 | |
11 | 3D 1H-13C NOESY | 400 uM IL-6 | 100% D2O | 100 | 6.4 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | Avance | 600 |
2 | Bruker | Avance | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | TOPSPIN |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 52 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TOPSPIN | Bruker Biospin | |
2 | processing | TOPSPIN | Bruker Biospin | |
3 | data analysis | SPARKY | Goddard | |
4 | chemical shift assignment | SPARKY | Goddard | |
5 | peak picking | SPARKY | Goddard | |
6 | data analysis | Molmol | Koradi, Billeter and Wuthrich |