2KU7

Solution structure of MLL1 PHD3-Cyp33 RRM chimeric protein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.3-0.5 mM [U-100% 13C; U-100% 15N] MLL PHD3-Cyp33 RRM, 20 mM sodium phosphate, 50 mM sodium chloride, 0.4 mM DSS93% H2O/7% D2O507.0ambient298.2
22D 1H-13C HSQC0.3-0.5 mM [U-100% 13C; U-100% 15N] MLL PHD3-Cyp33 RRM, 20 mM sodium phosphate, 50 mM sodium chloride, 0.4 mM DSS93% H2O/7% D2O507.0ambient298.2
33D HNCACB0.3-0.5 mM [U-100% 13C; U-100% 15N] MLL PHD3-Cyp33 RRM, 20 mM sodium phosphate, 50 mM sodium chloride, 0.4 mM DSS93% H2O/7% D2O507.0ambient298.2
43D CBCA(CO)NH0.3-0.5 mM [U-100% 13C; U-100% 15N] MLL PHD3-Cyp33 RRM, 20 mM sodium phosphate, 50 mM sodium chloride, 0.4 mM DSS93% H2O/7% D2O507.0ambient298.2
53D HBHA(CO)NH0.3-0.5 mM [U-100% 13C; U-100% 15N] MLL PHD3-Cyp33 RRM, 20 mM sodium phosphate, 50 mM sodium chloride, 0.4 mM DSS93% H2O/7% D2O507.0ambient298.2
63D HCCH-TOCSY0.3-0.5 mM [U-100% 13C; U-100% 15N] MLL PHD3-Cyp33 RRM, 20 mM sodium phosphate, 50 mM sodium chloride, 0.4 mM DSS93% H2O/7% D2O507.0ambient298.2
73D 15N-edited 1H-1H NOESY0.3-0.5 mM [U-100% 13C; U-100% 15N] MLL PHD3-Cyp33 RRM, 20 mM sodium phosphate, 50 mM sodium chloride, 0.4 mM DSS93% H2O/7% D2O507.0ambient298.2
83D 13C-edited 1H-1H NOESY0.3-0.5 mM [U-100% 13C; U-100% 15N] MLL PHD3-Cyp33 RRM, 20 mM sodium phosphate, 50 mM sodium chloride, 0.4 mM DSS93% H2O/7% D2O507.0ambient298.2
93D HNCO0.3-0.5 mM [U-100% 13C; U-100% 15N] MLL PHD3-Cyp33 RRM, 20 mM sodium phosphate, 50 mM sodium chloride, 0.4 mM DSS93% H2O/7% D2O507.0ambient298.2
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2BrukerAVANCE900
NMR Refinement
MethodDetailsSoftware
simulated annealing, molecular dynamicsTopSpin
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingNMRPipeDelaglio, F. et al.
3data analysisSparkyGoddard, T. et al.
4peak pickingSparkyGoddard, T. et al.
5structure solutionCYANAGuntert, P. et al.
6structure solutionX-PLOR NIHSchwieters, C. et al.
7refinementX-PLOR NIHSchwieters, C. et al.