2KRG

Solution Structure of human sodium/ hydrogen exchange regulatory factor 1(150-358)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
22D 1H-13C HSQC557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
33D HNCACB557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
43D CBCA(CO)NH557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
53D HNCA557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
63D HN(CO)CA557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
73D HNCO557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
83D HNCACB389 uM [U-100% 13C; U-100% 15N; U-80% 2H] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
93D HNCACB413 uM [U-100% 13C; U-100% 15N]-Leu,Val,Phe NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
103D 1H-15N NOESY557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
113D 1H-13C NOESY557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
123D 1H-15N NOESY413 uM [U-100% 13C; U-100% 15N]-Leu,Val,Phe NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
133D 1H-13C NOESY413 uM [U-100% 13C; U-100% 15N]-Leu,Val,Phe NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
143D H(CCO)NH557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
153D HCCH-TOCSY557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
163D HCCH-COSY557 uM [U-100% 13C; U-100% 15N] NHERF1 (150-358), 20 mM HEPES, 150 mM sodium chloride, 0.5 mM DTT, 0.1 mM PMSF90% H2O/10% D2O7.5ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE900
2BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealingAutomated NOE Assignment in CYANA, Final refinement in XPLOR-NIHTopSpin
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number500
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin2.1.3Bruker Biospin
2processingTopSpin2.1.3Bruker Biospin
3data analysisCARA1.5Keller, R. et al.
4chemical shift assignmentCARA1.5Keller, R. et al.
5structure solutionCYANA2.1Guntert, P. et al.
6structure solutionX-PLOR NIH2.24Schwieters, C. et al.
7refinementX-PLOR NIH2.24Schwieters, C. et al.