2KP8

Ligand bound to a model peptide that mimics the open fusogenic form


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1 mM [U-100% 13C; U-100% 15N] peptide, 6 mM 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE90% H2O/10% D2O258.0ambient318
22D 1H-13C HSQC1 mM [U-100% 13C; U-100% 15N] peptide, 6 mM 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE90% H2O/10% D2O258.0ambient318
33D CBCA(CO)NH1 mM [U-100% 13C; U-100% 15N] peptide, 6 mM 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE90% H2O/10% D2O258.0ambient318
43D HNCACB1 mM [U-100% 13C; U-100% 15N] peptide, 6 mM 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE90% H2O/10% D2O258.0ambient318
53D HBHA(CO)NH1 mM [U-100% 13C; U-100% 15N] peptide, 6 mM 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE90% H2O/10% D2O258.0ambient318
63D HCCH-TOCSY1 mM [U-100% 13C; U-100% 15N] peptide, 6 mM 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE90% H2O/10% D2O258.0ambient318
73D 1H-15N NOESY1 mM [U-100% 13C; U-100% 15N] peptide, 6 mM 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE90% H2O/10% D2O258.0ambient318
83D 1H-13C NOESY1 mM [U-100% 13C; U-100% 15N] peptide, 6 mM 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE90% H2O/10% D2O258.0ambient318
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX800
2BrukerDRX600
NMR Refinement
MethodDetailsSoftware
simulated annealing, Final minimization stepusing xplor, using schrodingerX-PLOR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number5
Representative Model1 (lowest energy)
Additional NMR Experimental Information
Detailsedited filtered Noesy experiments
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1geometry optimizationX-PLORBrunger, A.T. et al.
2refinementX-PLORBrunger, A.T. et al.
3data analysisTALOSCornilescu, G. et al.
4geometry optimizationSchrodingerSchrodinger