2KDG

Solution Structure of the 1st Ig domain of Myotilin


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
23D_15N-separated_NOESY0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
32D 1H-15N HSQC0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
42D 1H-13C HSQC0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
53D HNCA0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
63D HN(CO)CA0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
73D HNCACB0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
83D CBCA(CO)NH0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
93D C(CO)NH0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
103D H(CCO)NH0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
113D HCCH-COSY0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
123D iHNCA0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
132D 1H-13C HSQC (arom)0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
14(HB)CB(CGCD)HD0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
15(HB)CB(CGCDCE)HE0.5mM [U-13C; U-15N] Myotilin 249-344-1, 20mM potassium phosphate-2, 140mM sodium chloride-3, 1mM DTT-490% H2O/10% D2O1406.7ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITY800
2VarianUNITY500
NMR Refinement
MethodDetailsSoftware
molecular dynamicsBorn implicit solvent modelVNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations, structures with the lowest energy
Conformers Calculated Total Number40
Conformers Submitted Total Number25
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsDihedral angle restraints were extracted from alpha and beta carbon chemical shifts using TALOS program
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingVNMR6.1Varian Inc
2data analysisSparky3.106T. D. Goddard and D. G. Kneller
3data analysisTALOSGabriel Cornilescu, Frank Delaglio, and Ad Bax
4structure solutionCYANA2.1Guntert, P., Mumenthaler, C. & Wuthrich, K.
5refinementAmber8.0Case, D.A et al.