2JSN

Solution structure of the atypical PDZ-like domain of synbindin

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
2	2D 1H-13C HSQC	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
3	3D CBCA(CO)NH	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
4	3D HNCACB	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
5	3D HNCA	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
6	3D HNCO	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
7	3D HCCH-TOCSY	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
8	3D HBHA(CO)NH	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
9	2D CB(CGCD)HD	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
10	3D HN(CA)CO	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
11	3D 1H-15N TOCSY	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
12	3D 1H-15N NOESY	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
13	3D 1H-13C NOESY	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
14	3D HCCH-COSY	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293
15	3D CCH-TOCSY	1-1.5 mM [U-13C; U-15N] apd, 50 mM potassium phosphate, 0.01 % DSS, 0.01 % sodium azide	90% H2O/10% D2O	0.05	6.0	ambient	293

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	500

NMR Refinement
Method	Details	Software
molecular dynamics, simulated annealing		XwinNMR

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	XwinNMR		Bruker Biospin
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	processing	NMRView		Johnson, One Moon Scientific
4	structure solution	CYANA		Guntert, Mumenthaler and Wuthrich
5	refinement	SANE		Duggan, Legge, Dyson & Wright
6	refinement	Amber		Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Koll