2JQD

Structure of the Leucine-Rich Repeat domain of LANP


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY0.5 mM [U-98% 15N] LANP LRR domain, 10 mM TRIS, 2 mM TCEP, 90 % H2O, 10 % [U-99% 2H] D2O, 0.02 % sodium azide90% H2O/10% D2O7.0ambient300
23D 1H-13C NOESY0.5 mM [U-98% 13C; U-98% 15N] LANP LRR domain, 10 mM TRIS, 2 mM TCEP, 90 % H2O, 10 % [U-99% 2H] D2O, 0.02 % sodium azide90% H2O/10% D2O7.0ambient300
32D J-modulated 1H-15N HSQC0.5 mM [U-98% 15N] LANP LRR domain, 10 mM TRIS, 2 mM TCEP, 90 % H2O, 10 % [U-99% 2H] D2O, 0.02 % sodium azide90% H2O/10% D2O7.0ambient300
42D J-modulated 1H-15N HSQC0.5 mM [U-98% 15N] LANP LRR domain, 10 mM TRIS, 2 mM TCEP, 90 % H2O, 10 % [U-99% 2H] D2O, 0.02 % sodium azide90% H2O/10% D2O7.0ambient300
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
2BrukerAVANCE600
3VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealingwater refinementNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (regularity of secondary sturctures)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2processingNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3data analysisNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4data analysisXEASYBartels et al.
5chemical shift assignmentXEASYBartels et al.
6peak pickingXEASYBartels et al.
7structure solutionARIA1.2Linge, O'Donoghue and Nilges
8refinementARIA1.2Linge, O'Donoghue and Nilges