2JOR
NMR Solution Structure, Stability, and Interaction of the Recombinant Bovine Fibrinogen alphaC-Domain Fragment
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 150 uM [U-99% 13C; U-99% 15N] protein, 10 mM KPO4 pH 6.5, 150 mM NaCl | 90% H2O/10% D2O | 150 | 6.0 | ambient | 282 | |
2 | 3D HNCACB | 150 uM [U-99% 13C; U-99% 15N] protein, 10 mM KPO4 pH 6.5, 150 mM NaCl | 90% H2O/10% D2O | 150 | 6.0 | ambient | 282 | |
3 | 3D CBCA(CO)NH | 150 uM [U-99% 13C; U-99% 15N] protein, 10 mM KPO4 pH 6.5, 150 mM NaCl | 90% H2O/10% D2O | 150 | 6.0 | ambient | 282 | |
4 | 3D 1H-15N NOESY | 150 uM [U-99% 13C; U-99% 15N] protein, 10 mM KPO4 pH 6.5, 150 mM NaCl | 90% H2O/10% D2O | 150 | 6.0 | ambient | 282 | |
5 | 3D C(CO)NH | 150 uM [U-99% 13C; U-99% 15N] protein, 10 mM KPO4 pH 6.5, 150 mM NaCl | 90% H2O/10% D2O | 150 | 6.0 | ambient | 282 | |
6 | 2D 1H-15N HSQC | 150 uM [U-99% 13C; U-99% 15N] protein, 10 mM KPO4 pH 6.5, 150 mM NaCl | 90% H2O/10% D2O | 150 | 6.0 | ambient | 282 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, simulated annealing | X-PLOR NIH |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore |