2I06

Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- Locked form


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.7529813% PEG 3350, 50mM Bis-Tris pH6.75, 200mM NaI, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.7154.64

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 62.834α = 90
b = 62.834β = 90
c = 252.454γ = 90
Symmetry
Space GroupP 41 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315Rosenbaum-Rock monochromator, high-resolution double-crystal sagittal focusing, double crystal, Rosenbaum-Rock vertical focusing mirror2006-03-02MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.97929APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.25064.60.0720.07225.525.117442-2-226.833
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.22.2813.10.1750.1754.041.6344

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2EWJ2.250-2164991649987864.840.220980.220980.21780.28032RANDOM62.881
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.222.22-4.44
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.895
r_dihedral_angle_4_deg21.922
r_dihedral_angle_3_deg21.461
r_dihedral_angle_1_deg7.138
r_scangle_it3.191
r_scbond_it1.989
r_angle_refined_deg1.96
r_mcangle_it1.459
r_mcbond_it0.792
r_symmetry_hbond_refined0.405
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.895
r_dihedral_angle_4_deg21.922
r_dihedral_angle_3_deg21.461
r_dihedral_angle_1_deg7.138
r_scangle_it3.191
r_scbond_it1.989
r_angle_refined_deg1.96
r_mcangle_it1.459
r_mcbond_it0.792
r_symmetry_hbond_refined0.405
r_nbtor_refined0.313
r_symmetry_vdw_refined0.238
r_nbd_refined0.23
r_xyhbond_nbd_refined0.155
r_chiral_restr0.109
r_bond_refined_d0.016
r_gen_planes_refined0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2495
Nucleic Acid Atoms537
Solvent Atoms71
Heterogen Atoms3

Software

Software
Software NamePurpose
REFMACrefinement
ADSCdata collection
HKL-2000data reduction
HKL-2000data scaling