2HDP

Solution Structure of Hdm2 RING Finger Domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_1H15N_NOESY-HSQC0.1 mM Hdm2 RING domain, U-15N, 20 mM Tris, pH 7.1, 0.15M NaCl, 0.25M Arg, 0.5 mM TCEP, 5 uM ZnSO4, 90% H2O, 10% D2O90% H2O/10% D2O0.15 M NaCl7.1ambient298
23D_1H15N_TOCSY-HSQC0.1 mM Hdm2 RING domain, U-15N, 20 mM Tris, pH 7.1, 0.15M NaCl, 0.25M Arg, 0.5 mM TCEP, 5 uM ZnSO4, 90% H2O, 10% D2O90% H2O/10% D2O0.15 M NaCl7.1ambient298
3HNCA0.1 mM Hdm2 RING domain, U-15N, 20 mM Tris, pH 7.1, 0.15M NaCl, 0.25M Arg, 0.5 mM TCEP, 5 uM ZnSO4, 90% H2O, 10% D2O90% H2O/10% D2O0.15 M NaCl7.1ambient298
413C-HSQC0.1 mM Hdm2 RING domain, U-15N,13C, 20 mM Tris, pH 7.1, 0.15M NaCl, 0.5 mM TCEP, 5 uM ZnSO4, 90% H2O, 10% D2O90% H2O/10% D2O0.15 M NaCl7.1ambient298
52D NOESY0.1 mM Hdm2 RING domain, unlabled20 mM Tris, pH 7.1, 0.15M NaCl, 0.5 mM TCEP, 5 uM ZnSO4, 90% H2O, 10% D2O0.15 M NaCl7.1ambient298
62D TOCSY0.1 mM Hdm2 RING domain, unlabled20 mM Tris, pH 7.1, 0.15M NaCl, 0.5 mM TCEP, 5 uM ZnSO4, 90% H2O, 10% D2O0.15 M NaCl7.1ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE500
2BrukerDRX800
NMR Refinement
MethodDetailsSoftware
simulated annealingThe structure was based on a total of 1150 restraints, including 48 intermolecular and 112 dihedral angle.CYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA2.1Guentert, P.
2refinementAmber8Case, D. A.
3processingNMRPipe1Delaglio, F.
4data analysisNMRView5Johnson, B. A.