X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.52920.1M Na-Cacodylate pH 6.5, 30% PEG 8000, 0.15M Ammoniumsulfate, VAPOR DIFFUSION, SITTING DROP, temperature 292K
Crystal Properties
Matthews coefficientSolvent content
2.3948.53

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 53.43α = 77.93
b = 68.389β = 89.33
c = 109.369γ = 81.34
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCH2004-07-08MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE BW7B0.84140EMBL/DESY, HAMBURGBW7B

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.719.596.5164736158925-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.71.8596.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.719.4216457315092979920.206020.206020.203720.24881RANDOM35.642
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.917
r_dihedral_angle_3_deg15.236
r_dihedral_angle_4_deg10.791
r_dihedral_angle_1_deg6.328
r_scangle_it3.228
r_scbond_it2.148
r_angle_refined_deg1.41
r_mcangle_it1.34
r_mcbond_it0.815
r_nbtor_refined0.309
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.917
r_dihedral_angle_3_deg15.236
r_dihedral_angle_4_deg10.791
r_dihedral_angle_1_deg6.328
r_scangle_it3.228
r_scbond_it2.148
r_angle_refined_deg1.41
r_mcangle_it1.34
r_mcbond_it0.815
r_nbtor_refined0.309
r_nbd_refined0.205
r_symmetry_vdw_refined0.195
r_symmetry_hbond_refined0.152
r_xyhbond_nbd_refined0.136
r_chiral_restr0.098
r_bond_refined_d0.012
r_gen_planes_refined0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms10876
Nucleic Acid Atoms
Solvent Atoms947
Heterogen Atoms25

Software

Software
Software NamePurpose
REFMACrefinement
MAR345data collection
XDSdata scaling
AMoREphasing