2FPW

Crystal Structure of the N-terminal Domain of E.coli HisB- Phosphoaspartate intermediate.


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1EVAPORATION6.529330% (w/v) PEG monomethylether 550, 0.05M CaCl2, 0.1M Bis-Tris., pH 6.5, EVAPORATION, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.4449.69

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 52.983α = 90
b = 132.408β = 90
c = 105.685γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 4mirrors2005-08-18MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X8C1.1NSLSX8C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.755096.80.0717.15.23686236862
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.751.81920.257.14.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUTPDB Entry 2FPR1.75503662034795182596.570.1790.179250.177540.21104RANDOM17.561
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.26-0.811.06
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.187
r_dihedral_angle_4_deg20.941
r_dihedral_angle_3_deg11.718
r_dihedral_angle_1_deg5.966
r_scangle_it2.622
r_scbond_it1.681
r_angle_refined_deg1.281
r_mcangle_it1.086
r_mcbond_it0.663
r_nbtor_refined0.308
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.187
r_dihedral_angle_4_deg20.941
r_dihedral_angle_3_deg11.718
r_dihedral_angle_1_deg5.966
r_scangle_it2.622
r_scbond_it1.681
r_angle_refined_deg1.281
r_mcangle_it1.086
r_mcbond_it0.663
r_nbtor_refined0.308
r_nbd_refined0.193
r_symmetry_hbond_refined0.142
r_symmetry_vdw_refined0.139
r_xyhbond_nbd_refined0.112
r_chiral_restr0.089
r_metal_ion_refined0.074
r_bond_refined_d0.009
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2564
Nucleic Acid Atoms
Solvent Atoms458
Heterogen Atoms5

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling