2FMK

Crystal structure of Mg2+ and BeF3- bound CheY in complex with CheZ 200-214 solved from a P2(1)2(1)2 crystal grown in MES (pH 6.0)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP629837.5% PEG 8000, 0.05M sodium phosphate (monobasic), 0.1M MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties
Matthews coefficientSolvent content
1.9536.8

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.189α = 90
b = 61.953β = 90
c = 36.617γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42004-11-13MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X4A1.0718NSLSX4A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.9993099.40.05238.688208762-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.9992.0799.30.0821.5845

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1FQW1.999308782873587199.460.190640.190640.1860.232RANDOM10.921
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.22-0.091.31
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.684
r_dihedral_angle_3_deg12.53
r_dihedral_angle_4_deg8.093
r_dihedral_angle_1_deg5.26
r_scangle_it2.3
r_scbond_it1.4
r_angle_refined_deg1.116
r_mcangle_it0.901
r_mcbond_it0.532
r_nbtor_refined0.298
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.684
r_dihedral_angle_3_deg12.53
r_dihedral_angle_4_deg8.093
r_dihedral_angle_1_deg5.26
r_scangle_it2.3
r_scbond_it1.4
r_angle_refined_deg1.116
r_mcangle_it0.901
r_mcbond_it0.532
r_nbtor_refined0.298
r_symmetry_hbond_refined0.274
r_nbd_refined0.197
r_symmetry_vdw_refined0.175
r_xyhbond_nbd_refined0.125
r_chiral_restr0.076
r_metal_ion_refined0.014
r_bond_refined_d0.008
r_gen_planes_refined0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1098
Nucleic Acid Atoms
Solvent Atoms90
Heterogen Atoms5

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement