2FHO
NMR solution structure of the human spliceosomal protein complex p14-SF3b155
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 20mM Sodium Phosphate buffer (pH 6.5), 100mM NaCl, 1mM d-DTT; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100 | 6.5 | ambient | 308 | |
2 | 3D_13C-separated_NOESY | 20mM Sodium Phosphate buffer (pH 6.5), 100mM NaCl, 1mM d-DTT; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100 | 6.5 | ambient | 308 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics, RESTRAINTED ENERGY MINIMIZATION | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations, structures with the lowest energy, target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 3.5 | Bruker |
2 | processing | NMRPipe | 20030801 | Delaglio, F |
3 | data analysis | NMRView | 5.0.4 | Johnson, B.A |
4 | data analysis | KUJIRA | 0.8995 | Kobayashi, N |
5 | structure solution | CYANA | 2.1 | Guntert, P |
6 | structure solution | OPALp | 1.4 | Koradi, R. |
7 | refinement | CYANA | 2.1 | Guntert, P |
8 | refinement | OPALp | 1.4 | Koradi, R. |