X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.8293100mM Tris HCl; 2.2M Ammonium Sulfate; 2mM L-Cysteine, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.6152.96

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 61.186α = 90
b = 61.186β = 90
c = 166.999γ = 120
Symmetry
Space GroupP 65

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDSBC2003-11-11MSINGLE WAVELENGTH
21x-rayMMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.9641APS19-BM
2SYNCHROTRONAPS BEAMLINE 19-BM0.9807, 0.9808, 0.9537APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,21.40152.70.9860.05117.45.269296692961
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.4011.450.9590.3531.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.40152.76908765610347799.880.162730.162730.162070.17529RANDOM13.087
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.360.180.36-0.54
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg8.246
r_scangle_it2.722
r_mcangle_it1.847
r_scbond_it1.825
r_angle_refined_deg1.747
r_angle_other_deg1.241
r_mcbond_it1.102
r_symmetry_vdw_refined0.384
r_symmetry_vdw_other0.338
r_nbd_refined0.29
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg8.246
r_scangle_it2.722
r_mcangle_it1.847
r_scbond_it1.825
r_angle_refined_deg1.747
r_angle_other_deg1.241
r_mcbond_it1.102
r_symmetry_vdw_refined0.384
r_symmetry_vdw_other0.338
r_nbd_refined0.29
r_symmetry_hbond_refined0.245
r_nbd_other0.24
r_xyhbond_nbd_refined0.207
r_chiral_restr0.122
r_nbtor_other0.113
r_bond_refined_d0.012
r_gen_planes_refined0.007
r_gen_planes_other0.004
r_bond_other_d0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2351
Nucleic Acid Atoms
Solvent Atoms171
Heterogen Atoms

Software

Software
Software NamePurpose
HKL-2000data collection
SCALEPACKdata scaling
SOLVEphasing
REFMACrefinement
HKL-2000data reduction