X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.52930.1 M Hepes, 1.5 M Li2SO4, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
3.0159.18

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 93.657α = 90
b = 93.657β = 90
c = 265.855γ = 120
Symmetry
Space GroupP 61 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42005-07-20MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 5.0.21.0ALS5.0.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.655099.68369422
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.651.6896.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.75028369472681384899.840.210.207710.20660.22862RANDOM25.038
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.46-0.23-0.460.7
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.436
r_dihedral_angle_4_deg19.245
r_dihedral_angle_3_deg15.504
r_dihedral_angle_1_deg9.259
r_scangle_it3.278
r_scbond_it2.057
r_mcangle_it1.674
r_angle_refined_deg1.345
r_mcbond_it1
r_symmetry_hbond_refined0.934
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.436
r_dihedral_angle_4_deg19.245
r_dihedral_angle_3_deg15.504
r_dihedral_angle_1_deg9.259
r_scangle_it3.278
r_scbond_it2.057
r_mcangle_it1.674
r_angle_refined_deg1.345
r_mcbond_it1
r_symmetry_hbond_refined0.934
r_chiral_restr0.373
r_nbtor_refined0.313
r_symmetry_vdw_refined0.219
r_nbd_refined0.213
r_xyhbond_nbd_refined0.109
r_bond_refined_d0.01
r_gen_planes_refined0.005
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3888
Nucleic Acid Atoms
Solvent Atoms389
Heterogen Atoms10

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
SOLVEphasing