2E2Z
Solution NMR structure of yeast Tim15, co-chaperone of mitochondrial Hsp70
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 1-2mM Tim15; 20mM acetate buffer, 50mM NaCl, 10mM ditiothreitol, 0.03mM zinc acetate, zinc sulfate; 99.9% D2O | 99.9% D2O | 50mM NaCl | 4.5 | 1 atm | 299 | |
2 | 3D_15N-separated_NOESY | 1-2mM Tim15 U-15N; 20mM acetate buffer,50mM NaCl,10mM ditiothreitol, 0.03mM zinc acetate, zinc sulfate; 95% H2O,5% D2O | 95% H2O/5% D2O | 50mM NaCl | 4.5 | 1 atm | 299 | |
3 | 3D_13C-separated_NOESY | 1-2mM Tim15 U-15N, 13C; 20mM acetate buffer, 50mM NaCl, 10mM ditiothreitol, 0.03mM zinc acetate, zinc sulfate; 99.9% D2O | 99.9% D2O | 50mM NaCl | 4.5 | 1 atm | 299 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | NMRPipe | 2.4 | |
2 | structure solution | XwinNMR | 3.5 | |
3 | structure solution | Sparky | 3.110 | |
4 | refinement | CYANA | 2.1 | GUENTERT, P. |