2CAI

Structure of Glutathione-S-Transferase mutant, R21L, from Schistosoma Haematobium


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.410% PEG200, PBS PH7.4, 5MM MERCAPTOETHANOL, pH 7.40
Crystal Properties
Matthews coefficientSolvent content
2.6853.83

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 148.716α = 90
b = 148.716β = 90
c = 148.716γ = 90
Symmetry
Space GroupI 2 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2005-07-14MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID29ESRFID29

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.262099.10.0610.222257801
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.262.399.89.820.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1OE72.26105.4124373130999.80.2180.2150.272RANDOM34.25
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.823
r_dihedral_angle_4_deg17.181
r_dihedral_angle_3_deg16.348
r_dihedral_angle_1_deg6.311
r_scangle_it3.059
r_scbond_it1.96
r_angle_refined_deg1.508
r_mcangle_it1.375
r_mcbond_it0.818
r_nbtor_refined0.31
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.823
r_dihedral_angle_4_deg17.181
r_dihedral_angle_3_deg16.348
r_dihedral_angle_1_deg6.311
r_scangle_it3.059
r_scbond_it1.96
r_angle_refined_deg1.508
r_mcangle_it1.375
r_mcbond_it0.818
r_nbtor_refined0.31
r_symmetry_vdw_refined0.239
r_nbd_refined0.224
r_symmetry_hbond_refined0.208
r_xyhbond_nbd_refined0.156
r_chiral_restr0.106
r_bond_refined_d0.013
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3318
Nucleic Acid Atoms
Solvent Atoms183
Heterogen Atoms101

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing