2BKY

Crystal structure of the Alba1:Alba2 heterodimer from sulfolobus solfataricus


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.535% MPD, 50MM HEPES, 10MM TRIS, 100MM NACL, PH 7.5
Crystal Properties
Matthews coefficientSolvent content
2.1943.36

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 102.788α = 90
b = 102.788β = 90
c = 66.566γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-3ESRFID14-3

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.736.899.90.0922.610.8444203
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.71.7999.90.485.210.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.787.7142333220899.20.1720.170.205RANDOM18.6
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.510.250.51-0.76
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.928
r_scangle_it5.159
r_scbond_it3.093
r_mcangle_it2.114
r_angle_refined_deg1.875
r_mcbond_it1.17
r_angle_other_deg0.992
r_symmetry_vdw_refined0.952
r_symmetry_vdw_other0.575
r_symmetry_hbond_refined0.543
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.928
r_scangle_it5.159
r_scbond_it3.093
r_mcangle_it2.114
r_angle_refined_deg1.875
r_mcbond_it1.17
r_angle_other_deg0.992
r_symmetry_vdw_refined0.952
r_symmetry_vdw_other0.575
r_symmetry_hbond_refined0.543
r_xyhbond_nbd_refined0.265
r_nbd_other0.251
r_nbd_refined0.236
r_chiral_restr0.138
r_nbtor_other0.096
r_bond_refined_d0.019
r_gen_planes_other0.013
r_gen_planes_refined0.01
r_bond_other_d0.003
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2772
Nucleic Acid Atoms
Solvent Atoms324
Heterogen Atoms40

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
AMoREphasing