X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
1.8733.65

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 48.98α = 90
b = 56.532β = 103.69
c = 60.805γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONELETTRA BEAMLINE 5.2RELETTRA5.2R

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.929.5498.30.089.75.2253383
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.91.9395.70.332.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 2ACY1.9823644126698.80.1660.1620.215RANDOM44.37
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.45-1.240.79-0.93
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg28.944
r_dihedral_angle_4_deg23.338
r_dihedral_angle_3_deg15.863
r_dihedral_angle_1_deg7.047
r_scangle_it6.511
r_scbond_it5.37
r_mcangle_it3.61
r_mcbond_it2.799
r_angle_refined_deg1.997
r_angle_other_deg0.904
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg28.944
r_dihedral_angle_4_deg23.338
r_dihedral_angle_3_deg15.863
r_dihedral_angle_1_deg7.047
r_scangle_it6.511
r_scbond_it5.37
r_mcangle_it3.61
r_mcbond_it2.799
r_angle_refined_deg1.997
r_angle_other_deg0.904
r_symmetry_vdw_other0.357
r_nbtor_refined0.348
r_symmetry_hbond_refined0.333
r_nbd_other0.314
r_nbd_refined0.266
r_symmetry_vdw_refined0.251
r_xyhbond_nbd_refined0.219
r_chiral_restr0.15
r_nbtor_other0.092
r_bond_refined_d0.02
r_gen_planes_refined0.02
r_gen_planes_other0.002
r_bond_other_d
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2900
Nucleic Acid Atoms
Solvent Atoms184
Heterogen Atoms31

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing