2BFV

MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
18.5PROTEIN WAS CRYSTALLIZED FROM 15% (W/V) PEG 4000, 100MM NA ACETATE AND 50MM TRIS HCL PH 8.5
Crystal Properties
Matthews coefficientSolvent content
3.1460.8

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 53.6α = 90
b = 53.6β = 90
c = 83.8γ = 120
Symmetry
Space GroupP 32

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray293IMAGE PLATERIGAKUMSC DOUBLE FOCUSING MIRRORS1995-04-26M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RUH2R

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.52086.90.0647.211.578363
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.52.5987.50.2252.61.5

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTPDB ENTRY 1NBV2.51077407740840.18727.44
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor24.083
p_staggered_tor17.559
p_scangle_it8.05
p_scbond_it5.606
p_planar_tor4.259
p_mcangle_it2.054
p_mcbond_it1.199
p_multtor_nbd0.252
p_xyhbond_nbd0.214
p_singtor_nbd0.184
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor24.083
p_staggered_tor17.559
p_scangle_it8.05
p_scbond_it5.606
p_planar_tor4.259
p_mcangle_it2.054
p_mcbond_it1.199
p_multtor_nbd0.252
p_xyhbond_nbd0.214
p_singtor_nbd0.184
p_chiral_restr0.128
p_angle_d0.037
p_planar_d0.037
p_bond_d0.011
p_plane_restr0.01
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1789
Nucleic Acid Atoms
Solvent Atoms55
Heterogen Atoms33

Software

Software
Software NamePurpose
MOSFLMdata reduction
ROTAVATAdata reduction
AMoREphasing
PROLSQrefinement
CCP4data scaling