X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.1pH 7.10
Crystal Properties
Matthews coefficientSolvent content
2.2545.44

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 24.918α = 90
b = 40.141β = 90
c = 66.306γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATERIGAKU RAXIS IIC1995-05-13M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU200

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1234.30.074210301

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMIR24370376.40.156
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
n_phos_angle_it13.877
n_sugar_angle_it13.759
n_phos_bond_it13.759
n_sugar_bond_it12.632
n_singtor_nbd0.222
n_multtor_nbd0.22
n_chiral_restr0.054
n_plane_restr0.034
n_phos_bond_d0.029
n_bond_d
RMS Deviations
KeyRefinement Restraint Deviation
n_phos_angle_it13.877
n_sugar_angle_it13.759
n_phos_bond_it13.759
n_sugar_bond_it12.632
n_singtor_nbd0.222
n_multtor_nbd0.22
n_chiral_restr0.054
n_plane_restr0.034
n_phos_bond_d0.029
n_bond_d
n_angle_d
n_planar_d
n_hb_or_metal_coord
n_bond_angle_restr
n_dihedral_angle_restr
n_impr_tor
n_sugar_bond_d
n_sugar_bond_angle_d
n_phos_bond_angle_d
n_xhyhbond_nbd
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms
Nucleic Acid Atoms488
Solvent Atoms74
Heterogen Atoms36

Software

Software
Software NamePurpose
NUCLSQrefinement
RIGAKUdata reduction
RIGAKUdata scaling