1YXR

NMR Structure of VPS4A MIT Domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESYUniform labeling with 15N and 13C.50 mM NaCl, 20 mM sodium phosphate, 10% D2O50 mM NaCl5.5ambient298
23D_15N-separated_NOESYUniform labeling with 15N and 13C.50 mM NaCl, 20 mM sodium phosphate, 10% D2O50 mM NaCl5.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
automated NOE assignment using CYANA and torsion angle dynamics for structure calculationsThe structures are based on 1432 NOE derived distance constraints, 150 dihedral angle constraints (generated by TALOS) and 114 distance constraints from hydrogen bondsFelix
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model18 (lowest energy)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 3D heteronuclear techniques
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingFelix97Accelyrs, San Diego
2data analysisSparky3.110TD Goddard and DG Kneller
3structure solutionCYANA2.0P Guntert
4refinementCNS1.1AT Brunger, et al.