1M12

NMR solution structure of human Saposin C


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESYU-15N90% H20, 10% D20~10-20mM NaCl6.8ambient298
24D_13C/15N-separated_NOESYU-15N, U-13C90% H20, 10% D20~10-20mM NaCl6.8ambient298
34D_13C-separated_NOESYU-15N, U-13C100% D20~10-20mM NaCl6.8ambient298
43D_13C-separated_TOCSYU-15N, U-13C100% D20~10-20mM NaCl6.8ambient298
5CBCACONH, HNCACBU-15N, U-13C90% H20, 10% D20~10-20mM NaCl6.8ambient298
6experiments for residual dipolar coupling measurementsU-15N, U-13C90% H20, 10% D20~10-20mM NaCl6.8ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerDMX800
NMR Refinement
MethodDetailsSoftware
distance geometry and simulated annealingstructures were calculated with: 1806 NOE-derived destance constriants (no intra-residue NOEs used), 28 hydrogen bonds, 135 dihedral restraints, 276 residual dipolar couplings. Residues 1-3 and 79-84 are disordered. Superimposition of structures is from residues 4-78.XwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number163
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
Detailsresidual dipolar couplings measured in two different alignment media. Pf1 and fd phages
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.5Bruker
2processingNMRPipe2.1Delagio
3data analysisPIPP4.2.8Garrett
4refinementX-PLOR3.840Brunger