X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5.5298sodium acetate, PEG 400, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.754.2

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 60.928α = 90
b = 60.928β = 90
c = 159.257γ = 120
Symmetry
Space GroupP 32 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2004-11-22MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 14-ID-B0.9793, 0.9795, 0.9688APS14-ID-B

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.52598.31199411994
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.52.5991.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.5201127011078120698.640.24140.241480.237870.27424RANDOM41.547
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.39-0.7-1.392.09
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.382
r_scangle_it4.347
r_mcangle_it2.703
r_scbond_it2.569
r_mcbond_it1.437
r_angle_refined_deg1.012
r_nbd_refined0.223
r_symmetry_vdw_refined0.206
r_xyhbond_nbd_refined0.154
r_symmetry_hbond_refined0.118
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.382
r_scangle_it4.347
r_mcangle_it2.703
r_scbond_it2.569
r_mcbond_it1.437
r_angle_refined_deg1.012
r_nbd_refined0.223
r_symmetry_vdw_refined0.206
r_xyhbond_nbd_refined0.154
r_symmetry_hbond_refined0.118
r_chiral_restr0.071
r_bond_refined_d0.011
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1944
Nucleic Acid Atoms
Solvent Atoms43
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
SOLVEphasing