1YYC
Solution Structure of a putative late embryogenesis abundant (LEA) protein At2g46140.1
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 10 mM Bis-Tris, 100 mM NaCl,10 mM DTT, pH 7.0, 90% H2O,10% D2O | 90% H2O/10% D2O | 7.0 | 1 atm | 298.2 | ||
2 | 3D_15N-separated_NOESY | 10 mM Bis-Tris, 100 mM NaCl,10 mM DTT, pH 7.0, 90% H2O,10% D2O | 90% H2O/10% D2O | 7.0 | 1 atm | 298.2 | ||
3 | HNCACB | 10 mM Bis-Tris, 100 mM NaCl,10 mM DTT, pH 7.0, 90% H2O,10% D2O | 90% H2O/10% D2O | 7.0 | 1 atm | 298.2 | ||
4 | HN(CO)CACB | 10 mM Bis-Tris, 100 mM NaCl,10 mM DTT, pH 7.0, 90% H2O,10% D2O | 90% H2O/10% D2O | 7.0 | 1 atm | 298.2 | ||
5 | HCCHTOCSY | 10 mM Bis-Tris, 100 mM NaCl,10 mM DTT, pH 7.0, 90% H2O,10% D2O | 90% H2O/10% D2O | 7.0 | 1 atm | 298.2 | ||
6 | CCONH | 10 mM Bis-Tris, 100 mM NaCl,10 mM DTT, pH 7.0, 90% H2O,10% D2O | 90% H2O/10% D2O | 7.0 | 1 atm | 298.2 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 500 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing, molecular dynamics | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.6 | Bruker |
2 | processing | NMRPipe | 97.027.12.56 | Delaglio et al. |
3 | data analysis | Sparky | 3.72 | Goddard T.D. and Kneller, D.G. |
4 | structure solution | CYANA | 1.0.6 | Guntert et al |
5 | refinement | XPLOR-NIH | 2.9.3 | Schwieters, C.D. et al |