1YTP
Solution structure of the C4A/C41A variant of the Nicotiana alata proteinase inhibitor T1
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 1mM C4A/C41A-T1 | 90% H2O/10% D2O | 1mM | 5.8 | ambient | 313 | |
2 | 2D TOCSY | 1mM C4A/C41A-T1 | 90% H2O/10% D2O | 1mM | 5.8 | ambient | 313 | |
3 | DQF-COSY | 1mM C4A/C41A-T1 | 90% H2O/10% D2O | 1mM | 5.8 | ambient | 313 | |
4 | 2D NOESY | 1mM C4A/C41A-T1 | 99% D2O | 1mM | 5.8 | ambient | 313 | |
5 | 2D TOCSY | 1mM C4A/C41A-T1 | 99% D2O | 1mM | 5.8 | ambient | 313 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | ARX | 500 |
2 | Bruker | DMX | 750 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, torsion angle dynamics, explicit inclusion of water molecules (Linge & Nilges, 1999) | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 11 (lowest energy) |
Additional NMR Experimental Information | |
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Details | This structure was determined using standard 2D homonuclear techniques. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 3.5 | Bruker |
2 | processing | XwinNMR | 3.5 | Bruker |
3 | data analysis | ccnmr/glxcc | n.a. | Cieslar, Holak, Oschkinat, 1990 |
4 | refinement | CNS | 1.1 | Brunger |