1YJI

RDC-refined Solution NMR structure of reduced putidaredoxin


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
115N-coupled 2D 15N-1H HSQC; 7.5% bicelle (DMPC:DHPC-2.9:1)1 mM reduced putidaredoxin 15N; 50 mM Tris-Cl buffer, 50 mM KCl, pH 7.490% H2O/10% D2O50 mM KCl7.4ambient298
215N-coupled 2D 15N-1H HSQC; 10 mg/mL Phage1 mM reduced putidaredoxin 15N; 50 mM Tris-Cl buffer, 50 mM KCl, pH 7.490% H2O/10% D2O50 mM KCl7.4ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealingThe structures are based on 1241 NOE restriants, 160 dihedral angle restraints and 150 RDC restraints, 28 paramagnetic distance restraints from relaxation measurements and 18 distance restraints from hydrogen bondsXplor-NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number11
Representative Model9 (lowest energy)
Additional NMR Experimental Information
DetailsThe structures were refined against 15N-1H RDC restraints using previously published NOE and dihedral angle restraints for Pdx. The restraints for the metal binding loop (residues 36-48,85-86) were modeled from bovine adrenodoxin crystal structure.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementXplor-NIH2.9.6Schwieters, Kuszewski, Tjandra, Clore