1YCM

Solution Structure of matrix metalloproteinase 12 (MMP12) in the presence of N-Isobutyl-N-[4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY0.9 mM MMP12 U-15N,13C; 10 mM deuterated Tris, 5 mM CaCl2, 0.1 mM ZnCl2, 0.3 M NaCl; 90% H2O, 10% D2O90% H2O/10% D2O0.3 M NaCl7.2ambient298
23D_13C-separated_NOESY0.9 mM MMP12 U-15N,13C; 10 mM deuterated Tris, 5 mM CaCl2, 0.1 mM ZnCl2, 0.3 M NaCl; 90% H2O, 10% D2O90% H2O/10% D2O0.3 M NaCl7.2ambient298
32D NOESY0.9 mM MMP12 U-15N,13C; 10 mM deuterated Tris, 5 mM CaCl2, 0.1 mM ZnCl2, 0.3 M NaCl; 90% H2O, 10% D2O90% H2O/10% D2O0.3 M NaCl7.2ambient298
4HNHA0.9 mM MMP12 U-15N,13C; 10 mM deuterated Tris, 5 mM CaCl2, 0.1 mM ZnCl2, 0.3 M NaCl; 90% H2O, 10% D2O90% H2O/10% D2O0.3 M NaCl7.2ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE900
2BrukerAVANCE800
3BrukerAVANCE700
4BrukerDRX500
NMR Refinement
MethodDetailsSoftware
distance geometry, simulated annealing, torsion angle dynamics, residue dipolar couplingsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model20 (lowest energy)
Additional NMR Experimental Information
DetailsThis structure was determined using distance, dihedral angle and H-bond restraints with residue dipolar coupling restraints
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.1BRUNGER
2processingXwinNMR3.1BRUNGER
3data analysisXEASY1.3Guntert
4structure solutionDYANA1.5Guntert
5refinementAmber6.0Kollman