1Y0K

Structure of Protein of Unknown Function PA4535 from Pseudomonas aeruginosa strain PAO1, Monooxygenase Superfamily


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16.52981.5M Na Acetate, 0.1M Na Cacodylate, ph 6.5, VAPOR DIFFUSION, temperature 298K, pH 6.50
Crystal Properties
Matthews coefficientSolvent content
1.8934.8

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 70.422α = 90
b = 53.918β = 119.41
c = 55.583γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray150CCDSBC-22004-09-30MSAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-IDAPS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.755098.20.058.1184162
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.741.886.5

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSAD1.7548.39182801735192999.30.1880.1860.222RANDOM22.31
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.29-0.73-0.68-1.33
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.948
r_dihedral_angle_4_deg16.535
r_dihedral_angle_3_deg12.31
r_dihedral_angle_1_deg5.404
r_scangle_it3.068
r_scbond_it1.848
r_mcangle_it1.217
r_angle_refined_deg1.167
r_mcbond_it0.71
r_nbtor_refined0.309
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.948
r_dihedral_angle_4_deg16.535
r_dihedral_angle_3_deg12.31
r_dihedral_angle_1_deg5.404
r_scangle_it3.068
r_scbond_it1.848
r_mcangle_it1.217
r_angle_refined_deg1.167
r_mcbond_it0.71
r_nbtor_refined0.309
r_nbd_refined0.196
r_xyhbond_nbd_refined0.152
r_chiral_restr0.073
r_bond_refined_d0.009
r_gen_planes_refined0.004
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1453
Nucleic Acid Atoms
Solvent Atoms191
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling