1XJ1

3D solution structure of the C-terminal cysteine-rich domain of the VHv1.1 polydnaviral gene product


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D TOCSY1mM C-term VHv1.1, 25mM sodium phosphate, 100mM NaCl, 1mM EDTA, 0.01% sodium azide95% H2O/5% D2O100mM NaCl5.7ambient315
22D NOESY1mM C-term VHv1.1, 25mM sodium phosphate, 100mM NaCl, 1mM EDTA, 0.01% sodium azide95% H2O/5% D2O100mM NaCl5.7ambient315
3DQF-COSY1mM C-term VHv1.1, 25mM sodium phosphate, 100mM NaCl, 1mM EDTA, 0.01% sodium azide95% H2O/5% D2O100mM NaCl5.7ambient315
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics and simulated annealing protocols using CNSThe structures are based on 280 NOE-derived interproton distance constraints, 24 distance restraints from 12 hydrogen bondsXWINNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number25
Conformers Submitted Total Number25
Representative Model17 (lowest energy)
Additional NMR Experimental Information
DetailsThis ensemble of NMR structures was determined using standard 2D 1H homonuclear NMR techniques
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingXWINNMR2.6Bruker
2structure solutionCNS1.0Brunger
3refinementCNS1.0Brunger