1VSC

VCAM-1


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.1844

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 122.09α = 90
b = 48.86β = 117.42
c = 73.44γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayAREA DETECTORSIEMENS1994-04-08M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.910082.90.0593.925533

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION1.91532402682.90.2040.2040.28931.9
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
x_dihedral_angle_d29.7
x_scangle_it2.5
x_angle_deg2.1
x_improper_angle_d2.1
x_mcangle_it2
x_scbond_it2
x_mcbond_it1.5
x_bond_d0.016
x_angle_deg_prot
x_bond_d_na
RMS Deviations
KeyRefinement Restraint Deviation
x_dihedral_angle_d29.7
x_scangle_it2.5
x_angle_deg2.1
x_improper_angle_d2.1
x_mcangle_it2
x_scbond_it2
x_mcbond_it1.5
x_bond_d0.016
x_angle_deg_prot
x_bond_d_na
x_angle_d
x_dihedral_angle_d_prot
x_angle_d_na
x_improper_angle_d_na
x_improper_angle_d_prot
x_angle_d_prot
x_bond_d_prot
x_angle_deg_na
x_dihedral_angle_d_na
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3618
Nucleic Acid Atoms
Solvent Atoms303
Heterogen Atoms

Software

Software
Software NamePurpose
BUDDHAdata collection
X-PLORmodel building
X-PLORrefinement
BUDDHAdata reduction
X-PLORphasing