1UNV

Structure Based Engineering of Internal Molecular Surfaces Of Four Helix Bundles


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7HANGING DROP, RESERVOIR: 10%W/V PEG 6K, 2 M NACL, PH 7.0
Crystal Properties
Matthews coefficientSolvent content
2.550

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 78.089α = 90
b = 78.089β = 90
c = 78.089γ = 90
Symmetry
Space GroupP 41 3 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray1142003-07-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU200

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.0734.9297.70.0559.13.753652
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.072.141000.3611.63.32

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.1455.05457922498.60.2410.302RANDOM50.48
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_scangle_it10.393
r_dihedral_angle_1_deg10.159
r_scbond_it7.164
r_mcangle_it5.309
r_angle_refined_deg4.791
r_mcbond_it3.108
r_angle_other_deg2.342
r_symmetry_vdw_refined0.506
r_chiral_restr0.438
r_symmetry_vdw_other0.318
RMS Deviations
KeyRefinement Restraint Deviation
r_scangle_it10.393
r_dihedral_angle_1_deg10.159
r_scbond_it7.164
r_mcangle_it5.309
r_angle_refined_deg4.791
r_mcbond_it3.108
r_angle_other_deg2.342
r_symmetry_vdw_refined0.506
r_chiral_restr0.438
r_symmetry_vdw_other0.318
r_nbd_refined0.273
r_nbd_other0.265
r_xyhbond_nbd_refined0.192
r_nbtor_other0.133
r_bond_refined_d0.075
r_gen_planes_other0.051
r_symmetry_hbond_refined0.045
r_gen_planes_refined0.037
r_bond_other_d0.004
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms420
Nucleic Acid Atoms
Solvent Atoms4
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
CrystalCleardata reduction
SCALAdata scaling
MOLREPphasing