1U34
3D NMR structure of the first extracellular domain of CRFR-2beta, a type B1 G-protein coupled receptor
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 0.2mM 13C, 15N labelled ECD1-CRFR2b in 10mM BisTris(HCl); pH 7.4 | 95% H2O/5% D2O | 0.2mM in 10mM BisTris(HCl) | 7.4 | Ambient | 298 | |
2 | 3D_13C-separated_NOESY | 0.2mM 13C, 15N labelled ECD1-CRFR2b in 10mM BisTris(HCl); pH 7.4 | 95% H2O/5% D2O | 0.2mM in 10mM BisTris(HCl) | 7.4 | Ambient | 298 | |
3 | HNCA-J | 0.2mM 13C, 15N labelled ECD1-CRFR2b in 10mM BisTris(HCl); pH 7.4 | 95% H2O/5% D2O | 0.2mM in 10mM BisTris(HCl) | 7.4 | Ambient | 298 | |
4 | 3D CBCA(CO)NH | 0.2mM 13C, 15N labelled ECD1-CRFR2b in 10mM BisTris(HCl); pH 7.4 | 95% H2O/5% D2O | 0.2mM in 10mM BisTris(HCl) | 7.4 | Ambient | 298 | |
5 | 2D TOCSY | 0.2mM 13C, 15N labelled ECD1-CRFR2b in 10mM BisTris(HCl); pH 7.4 | 100% D2O | 0.2mM in 10mM BisTris(HCl) | 7.4 | Ambient | 298 | |
6 | 2D NOESY | 0.2mM 13C, 15N labelled ECD1-CRFR2b in 10mM BisTris(HCl); pH 7.4 | 100% D2O | 0.2mM in 10mM BisTris(HCl) | 7.4 | Ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 700 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, simulated annealing, molecular dynamics, torsion angle dynamics | A total of 1089 meaningful distance restraints and 362 angle restraints were used as an input in the program CYANA followed by restrained energy minimisation using INSIGHT. | CYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 6 (closest to the average) |
Additional NMR Experimental Information | |
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Details | The NOEs for structure calculation were taken from 3D and 2D NOESY experiments |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | 1.0.6 | Peter Guntert, Torsten Herrmann |
2 | refinement | CYANA | 1.0.6 | Peter Guntert, Torsten Herrmann |