1T3O

Solution structure of CsrA, a bacterial carbon storage regulatory protein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY0.5 mM CsrA; U-15N; 50mM phosphate buffer; 150 mM NaCl; 100% D2O100% D2O150 mM NaCl5.2ambient300
23D_15N-separated_NOESY0.5 mM CsrA; U-15N; 50mM phosphate buffer; 150 mM NaCl; 95% H2O, 5% D2O95% H2O/5% D2O150 mM NaCl5.2ambient300
32D NOESY0.5 mM CsrA; U-15N; 50mM phosphate buffer; 150 mM NaCl; 95% H2O, 5% D2O95% H2O/5% D2O150 mM NaCl5.2ambient300
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerDRX700
3BrukerDRX750
NMR Refinement
MethodDetailsSoftware
Automatic peak assignment by ARIA; simulated annealing in CNS;200 structures are calculated in each iteration; 30 structures with lowest restraint energy refined after iteration 8. Refinement carried out by inclusion of implicit water solvent.XwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number30
Conformers Submitted Total Number14
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsIn general, all NMR experiments were performed essentially as described in Cavanagh, et al. (1996), especially for 3D experiments required for sequential backbone assignments
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.1Bruker
2processingNMRPipeDelaglio et al.
3data analysisNMRView5.0Johnson, B
4structure solutionARIA1.2Linge, J/ Nilges, M
5structure solutionCNS1.1Brunger
6refinementCNS1.1Brunger