1SU0

Crystal structure of a hypothetical protein at 2.3 A resolution


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP72981.9 M Sodium Malonate, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.1342.21

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 72.014α = 90
b = 72.014β = 90
c = 112.713γ = 90
Symmetry
Space GroupI 4 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42003-06-29MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 5.0.20.9794, 0.9796, 0.9600ALS5.0.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.3609870566915
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.32.35998

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.3206570645732098.270.22150.219810.25582RANDOM24.217
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.460.46-0.92
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.689
r_scangle_it2.36
r_scbond_it1.563
r_angle_refined_deg1.362
r_mcangle_it1.018
r_angle_other_deg0.848
r_mcbond_it0.552
r_xyhbond_nbd_refined0.29
r_nbd_refined0.236
r_nbd_other0.231
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.689
r_scangle_it2.36
r_scbond_it1.563
r_angle_refined_deg1.362
r_mcangle_it1.018
r_angle_other_deg0.848
r_mcbond_it0.552
r_xyhbond_nbd_refined0.29
r_nbd_refined0.236
r_nbd_other0.231
r_symmetry_vdw_other0.217
r_symmetry_vdw_refined0.149
r_nbtor_other0.093
r_chiral_restr0.083
r_bond_refined_d0.012
r_gen_planes_refined0.004
r_gen_planes_other0.004
r_bond_other_d0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1026
Nucleic Acid Atoms
Solvent Atoms22
Heterogen Atoms1

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
SOLVEphasing