1SP7
Structure of the Cys-rich C-terminal domain of Hydra minicollagen
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 6 mM MCRD | 90 % H2O, 10 % D2O, 5 mM phosphate pH 6.5 | ~15 mM | 6.5 | ambient | 288 | |
2 | 2D TOCSY | 6 mM MCRD | 90 % H2O, 10 % D2O, 5 mM phosphate pH 6.5 | ~15 mM | 6.5 | ambient | 288 | |
3 | 2D NOESY | 2 mM MCRD | 100 % D2O, 5 mM phosphate pH 6.5 | ~15 mM | 6.5 | ambient | 288 | |
4 | 2D TOCSY | 2 mM MCRD | 100 % D2O, 5 mM phosphate pH 6.5 | ~15 mM | 6.5 | ambient | 288 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 600 |
2 | Bruker | DRX | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing with torsion angle dynamics | standard CNS protocol | XwinNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Additional NMR Experimental Information | |
---|---|
Details | natural abundance spectra for RDCs and TALOS |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.6 | Bruker |
2 | data analysis | NMRPipe | 2.1 | Delaglio et al. |
3 | data analysis | PIPP | 4.3.2 | Garrett et al. |
4 | structure solution | CNS | 1.0 | Brunger et al. |
5 | refinement | CNS | 1.0 | BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ,RICE,SIMONSON,WARREN |