1SG4

Crystal structure of human mitochondrial delta3-delta2-enoyl-CoA isomerase


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP4.1294.15PEG 6000, sodium acetate, sodium cloride, pH 4.1, VAPOR DIFFUSION, HANGING DROP, temperature 294.15K
Crystal Properties
Matthews coefficientSolvent content
2.3346.9

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 100.984α = 90
b = 78.288β = 116.39
c = 113.209γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHbent mirrors2002-05-10MSINGLE WAVELENGTH
21x-ray100CCDMARRESEARCHbent mirrors2002-05-10MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X130.802EMBL/DESY, HAMBURGX13
2SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X130.9202, 0.9184, 0.8500EMBL/DESY, HAMBURGX13

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,21.32094.50.05717.33.118269616.6
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.31.3182.10.2012.73.15263

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMAD1.32018269617354691500.1570.1570.202random23.8
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
s_non_zero_chiral_vol0.069
s_zero_chiral_vol0.064
s_angle_d0.031
s_bond_d0.012
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6076
Nucleic Acid Atoms
Solvent Atoms667
Heterogen Atoms57

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
SHELXDphasing
SHELXL-97refinement