1SBU

NMR structure of a peptide containing a dimetylthiazolidine : an analog of delta conotoxin EVIA loop 2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESYpeptide concentration : 2mM90% H2O/10% D2O31 atm283
22D TOCSYpeptide concentration : 2mM90% H2O/10% D2O31 atm283
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE500
2VarianUNITYPLUS500
NMR Refinement
MethodDetailsSoftware
The peptide was subjected to simulated annealing restraints molecular dynamics using the cvff forcefieldIRMA was used to refine the structureXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations, structures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.6
2collectionVNMR2000 (6.1)
3processingFelix2000
4structure solutionDiscover2.98
5refinementIRMA200Boelens R, Koning TMG, Kaptein R