1RMX

A SHORT LEXITROPSIN THAT RECOGNIZES THE DNA MINOR GROOVE AT 5'-ACTAGT-3': UNDERSTANDING THE ROLE OF ISOPROPYL-THIAZOLE


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY2.4mM DNA duplex with 2 equivalents of AIK13/20 ligand, 90% H2O, 10% D2O90% H2O/10% D2O100mM NaCl7.01 atm298
22D TOCSY2.4mM DNA duplex with 2 equivalents of AIK13/20 ligand, 90% H2O, 10% D2O90% H2O/10% D2O100mM NaCl7.01 atm298
3DQF-COSY2.4mM DNA duplex with 2 equivalents of AIK13/20 ligand, 90% H2O, 10% D2O90% H2O/10% D2O100mM NaCl7.01 atm298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
2VarianINOVA600
3BrukerAVANCE600
4BrukerAMX400
NMR Refinement
MethodDetailsSoftware
Restrained Molecular DynamicsSYBYL
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number1
Representative Model1 (minimized average structure)
Additional NMR Experimental Information
DetailsThe structure was determined using standard 2D homonuclear techniques
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1iterative matrix relaxationSYBYL6.3TRIPOS INC.
2collectionXwinNMR3.0Bruker
3collectionVNMR6Varian
4refinementSYBYL6.3TRIPOS INC.
5data analysisSparky3.105Goddard & Kneller