1R6E

Solution structure of the catalytic domain of SopE2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY~1mM U-15N,13C; 20mM HEPES buffer, pH 7.0, 90% H2O, 10%D2O90% H2O/10% D2O07.0ambient298
22D NOESY~1mM U-15N,13C; 20mM HEPES buffer, pH 7.0, 90% H2O, 10%D2O90% H2O/10% D2O07.0ambient298
33D_15N-separated_NOESY~1mM U-15N,13C; 20mM HEPES buffer, pH 7.0, 90% H2O, 10%D2O90% H2O/10% D2O07.0ambient298
4HNHA~1mM U-15N,13C; 20mM HEPES buffer, pH 7.0, 90% H2O, 10%D2O90% H2O/10% D2O07.0ambient298
52D NOESY1mM unlabelled, 20mM tris-d11, 1mM DTT-d1099.96% D2O07.0ambient298
62D TOCSY1mM unlabelled, 20mM tris-d11, 1mM DTT-d1099.96% D2O07.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealingthe structures are based on a total of 2931 restraints, 2548 are NOE-derived distance constraints, 249 dihedral angle restraints,134 distance restraints from hydrogen bonds.SPARKY
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1data analysisSPARKY3.106Goddard & kneller
2structure solutionXPLOR-NIH2.02Schwieters et al
3refinementXPLOR-NIH2.06Schwieters et al
4processingNMRPipe2.1Delagio