1R21
Solution Structure of human Ki67 FHA Domain
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 0.5 mM U-13C,15N-protein; 10 mM TrisHCl buffer (pH 8.4); 2mM DTT; 1 mM EDTA | 95% H2O, 10% D2O | 0 | 8.4 | ambient | 290 | |
2 | 3D_15N-separated_NOESY | 0.5 mM U-13C,15N-protein; 10 mM TrisHCl buffer (pH 8.4); 2mM DTT; 1 mM EDTA | 95% H2O, 10% D2O | 0 | 8.4 | ambient | 290 | |
3 | 3D_13C-separated_NOESY | 0.5 mM U-13C,15N-protein; 5 mM HEPES buffer (pH 7.5); 2mM DTT; 1 mM EDTA; 150 mM NaCl | 95% H2O, 10% D2O | 150 mM NaCl | 7.5 | ambient | 290 | |
4 | 3D_15N-separated_NOESY | 0.5 mM U-13C,15N-protein; 5 mM HEPES buffer (pH 7.5); 2mM DTT; 1 mM EDTA; 150 mM NaCl | 95% H2O, 10% D2O | 150 mM NaCl | 7.5 | ambient | 290 | |
5 | 2D NOESY | 0.5 mM unlabeled-protein; 10 mM TrisHCl buffer (pH 8.4); 2mM DTT; 1 mM EDTA | 95% H2O, 10% D2O | 0 | 8.4 | ambient | 290 | |
6 | 2D NOESY | 0.5 mM unlabeled-protein; 10 mM TrisHCl buffer (pH 8.4); 2mM DTT; 1 mM EDTA | 100% D2O | 0 | 8.4 | ambient | 290 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 800 |
2 | Bruker | DMX | 600 |
3 | Bruker | DRX | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | The structures are based on a total of 1921 constraints: 1694 from NOE, 62 from H-bonding, 165 from dihedral angle constraints | XwinNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy,target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 23 |
Representative Model | 1 (minimized average structure) |
Additional NMR Experimental Information | |
---|---|
Details | The structure was determined using triple-resonance NMR spectroscopy |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.6 | Bruker |
2 | processing | XwinNMR | 2.6 | Bruker |
3 | structure solution | X-PLOR | NIH version | Brunger,Schwieters, Kuszewski, Tjandra, Clore |
4 | refinement | X-PLOR | NIH version | Brunger,Schwieters, Kuszewski, Tjandra, Clore |