1R1F
Solution Structure of the Cyclotide Palicourein: Implications for the development of pharmaceutical and agricultural applications
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D TOCSY | 3.8 mM Palicourein, 90% H2O, 10% D2O | 90% H2O/10% D2O | 4.0 | ambient | 295 | ||
2 | 2D NOESY | 3.8 mM Palicourein, 90% H2O, 10% D2O | 90% H2O/10% D2O | 4.0 | ambient | 295 | ||
3 | E-COSY |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 750 |
2 | Bruker | ARX | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, torsion angle dynamics | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | lowest energy structures |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure calculation | DYANA | Guntert, Braun and Wuthrich | |
2 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read |