1QZN

Crystal Structure Analysis of a type II cohesin domain from the cellulosome of Acetivibrio cellulolyticus


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP4.6298ammonium sulfate, sodium acetate trihydrate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties
Matthews coefficientSolvent content
2.6753.94

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 55.088α = 90
b = 55.088β = 90
c = 112.553γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray298IMAGE PLATERIGAKU RAXIS IVOSMIC confocal multi-layer mirrors2002-02-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU ULTRAX 181.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.947.6899.80.0720.07220.881611816118-320
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.91.9399.10.6620.6622.0166759

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSIRASTHROUGHOUT1.947.67153081530881099.710.161330.161330.159330.19868RANDOM26.327
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.53-0.27-0.530.8
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg7.28
r_scangle_it6.407
r_scbond_it4.028
r_mcangle_it2.848
r_angle_refined_deg2.021
r_mcbond_it1.489
r_angle_other_deg0.91
r_symmetry_vdw_other0.362
r_symmetry_vdw_refined0.265
r_nbd_other0.253
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg7.28
r_scangle_it6.407
r_scbond_it4.028
r_mcangle_it2.848
r_angle_refined_deg2.021
r_mcbond_it1.489
r_angle_other_deg0.91
r_symmetry_vdw_other0.362
r_symmetry_vdw_refined0.265
r_nbd_other0.253
r_nbd_refined0.25
r_xyhbond_nbd_refined0.205
r_chiral_restr0.123
r_nbtor_other0.09
r_bond_refined_d0.027
r_gen_planes_refined0.008
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1286
Nucleic Acid Atoms
Solvent Atoms96
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
MLPHAREphasing