1Q02

NMR structure of the UBA domain of p62 (SQSTM1)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY2mM UBA, phosphate buffer pH 5.810% D2O, 90% H2O50mM potassium phosphate5.8ambient298
22D TOCSY2mM UBA, phosphate buffer pH 5.810% D2O, 90% H2O50mM potassium phosphate5.8ambient298
32D NOESY2mM UBA, phosphate buffer pH 5.810% D2O, 90% H2O50mM potassium phosphate5.8ambient308
42D TOCSY2mM UBA, phosphate buffer pH 5.810% D2O, 90% H2O50mM potassium phosphate5.8ambient308
5DQF-COSY2mM UBA, phosphate buffer pH 5.890% D2O, 10% H2O50mM potassium phosphate5.8ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance600
NMR Refinement
MethodDetailsSoftware
restrained simulated annealingXWINNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry,structures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number27
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingXWINNMR2.5Bruker
2structure solutionX-PLOR3.1Brunger, AT
3data analysisANSIG3.3Kraulis, PJ
4refinementX-PLOR3.1Brunger, AT