1P94

NMR Structure of ParG symmetric dimer


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY1 mM ParG U-15N,13C; 100 mM NaCl, 50 mM phosphate buffer, 1 mM DTT; 90% H2O, 10% D2O90% H2O/10% D2O150 mM5.5ambient293
23D_15N-separated_NOESY1 mM ParG U-15N; 100 mM NaCl, 50 mM phosphate buffer, 1 mM DTT; 90% H2O, 10% D2O90% H2O/10% D2O150 mM5.5ambient293
32D NOESY1 mM ParG U-15N; 100 mM NaCl, 50 mM phosphate buffer, 1 mM DTT; 100% D2O100% D2O150 mM5.5ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerDRX800
3VarianINOVA800
NMR Refinement
MethodDetailsSoftware
ARIA protocol (Nilges, M. et al., (1997) J. Mol. Biol. 269, 408-422) was used to deal with ambiguous distance restraints and for some NOE assignments.The ParG structure is based on 2230 ambiguous NOE restraints, 82 hydrogen bond restraints, and 144 CSI-based dihedral angle restraints. N-terminal region of ParG (1-32) is unstructured. The C-terminal region (33-76) is structured.NMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy,target function
Conformers Calculated Total Number20
Conformers Submitted Total Number11
Representative Model1 (minimized average structure)
Additional NMR Experimental Information
DetailsBEST REPRESENTATIVE CONFORMER (MODEL 1) IN THIS ENSEMBLE WAS OBTAINED BY ENERGY MINIMIZATION OF THE AVERAGE STRUCTURE, CALCULATED FOR MODELS 2-11
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio et al.
2data analysisNMRView5.01Johnson and Blevins
3structure solutionARIA1.1Nilges et al.
4structure solutionCNS1.0Brunger et al.
5refinementCNS1.0Brunger et al.