1OV2
Ensemble of the solution structures of domain one of receptor associated protein
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | ~1.2 mM of 13C/15N isotope labeled domain 1 of receptor associated protein | 50 mM NaCl, 75 mM NaPi, pH 6.5 | 50 mM NaCl, 75 mM NaPi | 6.5 | ambient | 303.5 | |
2 | 3D_13C-separated_NOESY | ~1.2 mM of 13C/15N isotope labeled domain 1 of receptor associated protein | 50 mM NaCl, 75 mM NaPi, pH 6.5 | 50 mM NaCl, 75 mM NaPi | 6.5 | ambient | 303.5 | |
3 | HNHA | ~1.2 mM of 13C/15N isotope labeled domain 1 of receptor associated protein | 50 mM NaCl, 75 mM NaPi, pH 6.5 | 50 mM NaCl, 75 mM NaPi | 6.5 | ambient | 303.5 | |
4 | 4D_13C/15N-separated_NOESY | ~1.2 mM of 13C/15N isotope labeled domain 1 of receptor associated protein | 50 mM NaCl, 75 mM NaPi, pH 6.5 | 50 mM NaCl, 75 mM NaPi | 6.5 | ambient | 303.5 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
2 | Varian | INOVA | 600 |
3 | Varian | INOVA | 800 |
NMR Refinement | ||
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Method | Details | Software |
torsiona angle dynamics and simulated anealing | The structures were determined using multi-dimension hetero-nuclear NMR spectroscopy. The constraints consist of NOE, diheadral, J-coupling, chemical shift, conformational data base as well as two setsof dipolar couplings measured from two different alignment media. | xplor-nih |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 60 |
Conformers Submitted Total Number | 39 |
Representative Model | 1 (closest to the average,minimized average structure) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | xplor-nih | 1 | Schwieters, C. |
2 | processing | NMRPipe | 1 | Delarglio, F. |
3 | structure solution | interhlx | 1 | K. Yap, University of Toronto, Cananda |
4 | refinement | interhlx | 1 | K. Yap, University of Toronto, Cananda |