1OAI

Complex between Tap UBA domain and FxFG nucleoporin peptide


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16.5AS DESCRIBED IN MANUSCRIPT, pH 6.50
Crystal Properties
Matthews coefficientSolvent content
2.3137.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.974α = 90
b = 42.974β = 90
c = 66.852γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDASCD2002-04-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM14ESRFBM14

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1124.851000.0655.3345.5638728
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
111.051000.361.924.77

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMIRASTHROUGHOUT163694319321000.1490.159RANDOM10.96
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.030.010.03-0.04
RMS Deviations
KeyRefinement Restraint Deviation
r_scangle_it5.611
r_dihedral_angle_1_deg4.602
r_scbond_it3.871
r_mcangle_it3.014
r_angle_refined_deg1.947
r_mcbond_it1.932
r_angle_other_deg0.887
r_symmetry_vdw_other0.334
r_nbd_refined0.288
r_nbd_other0.264
RMS Deviations
KeyRefinement Restraint Deviation
r_scangle_it5.611
r_dihedral_angle_1_deg4.602
r_scbond_it3.871
r_mcangle_it3.014
r_angle_refined_deg1.947
r_mcbond_it1.932
r_angle_other_deg0.887
r_symmetry_vdw_other0.334
r_nbd_refined0.288
r_nbd_other0.264
r_symmetry_vdw_refined0.252
r_xyhbond_nbd_refined0.23
r_symmetry_hbond_refined0.226
r_chiral_restr0.115
r_nbtor_other0.096
r_bond_refined_d0.022
r_gen_planes_refined0.01
r_gen_planes_other0.008
r_bond_other_d0.003
r_dihedral_angle_4_deg
r_nbtor_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_xyhbond_nbd_other
r_mcbond_other
r_metal_ion_refined
r_mcangle_other
r_dihedral_angle_3_deg
r_scbond_other
r_dihedral_angle_2_deg
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms542
Nucleic Acid Atoms
Solvent Atoms127
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
CCP4phasing