1NG7
The Solution Structure of the Soluble Domain of Poliovirus 3A Protein
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 1-3 mM 3A-N U-95% 13C;U-99% 15N; 20mM phosphate buffer NA; 100% D2O | 100% D2O | 20 mM potassium phosphate, 50 mM NaCl | 7.0 | ambient | 25 | |
2 | 2D NOESY | 1-3 mM 3A-N U-95% 13C;U-99% 15N; 20mM phosphate buffer NA; 100% D2O | 100% D2O | 20 mM potassium phosphate, 50 mM NaCl | 7.0 | ambient | 25 | |
3 | 3D_15N-separated_NOESY | 1-3 mM 3A-N U-99% 15N; 20mM phosphate buffer NA; 95% H2O, 5% D2O | 95% H2O/5% D2O | 20 mM potassium phosphate, 50 mM NaCl | 7.0 | ambient | 25 | |
4 | 3D_15N-separated_NOESY | 2 mM 3A-N U-99% 15N; 10 mM tris buffer NA; 95% H2O, 5% D2O | 95% H2O/5% D2O | 10 mM tris, 50 mM NaCl | 7.0 | ambient | 25 | |
5 | 3D_13C-separated select/filter NOESY | 1.5 mM 3A-N NA; 1.5 mM 3A-N U-95% 13C;U-99% 15N; 20mM phosphate buffer NA; 100% D2O | 100% D2O | 20 mM potassium phosphate, 50 mM NaCl | 7.0 | ambient | 25 | |
6 | 3D_13C-separated_NOESY | 1-3 mM 3A-N U-95% 13C;U-99% 15N; 20mM phosphate buffer NA; 95% H2O, 5% D2O | 95% H2O/5% D2O | 20 mM potassium phosphate, 50 mM NaCl | 7.0 | ambient | 25 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry/simmulated annealing | The structures are based on a total of 866 intramonomer and 46 intermonomer NOE-derived distance constraints and 34 TALOS-derived dihedral angle restraints. The monomer structure was calculated first and then the dimer was built from random monomer starting orientations. | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (closest to the average) |
Additional NMR Experimental Information | |
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Details | This structure was determined using standard 3D heteronuclear techniques. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1a | Varian |
2 | processing | NMRPipe | 1.0 | Delaglio |
3 | data analysis | ANSIG | 3.3 | Kraulis |
4 | refinement | X-PLOR | 3.851 | Brunger |